Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015858780.1_cds_XP_016514067.1_26554
CDS Infomation

[gene=LOC107830902] [db_xref=GeneID:107830902] [protein=cyclic nucleotide-gated ion channel 4-like] [protein_id=XP_016514067.1] [location=complement(join(6516..6765,7400..7665,8219..8305,8928..9164,9890..9998,10403..10716,11573..11788,13711..14181))] [gbkey=CDS]
Sequence

ATGACTAGTCATTATGAGGATATATACAGTGTCAGTGACGATGACAACGACGACGACGAA
GAAGAAGAAATTGAAGAAGAAGAAGAAAATAACTCAGAAGAATGTAACAAAATTCAAGAA
GGCAGAAATAAAGGAAGATTAATCATAGAATTTTTCTCAAGAAATAAGATAATAGACCCT
AGAGCACAATGGGTTCAAGAATGGAACAGAGTATTTTTATTAGTATGTGCCATAGGGCTA
TTTTTAGACCCTTTATTTTTCTATGCTCTTTCTATAAGTGAGAATTGCATGTGTCTCTTC
GTCGACGGTTGGTTCGCCGTGACGGTGACGGTTCTCCGGTGCATGACCGACGCATTGCAC
GTGTGGAATATGTGGTTGCAATTCAAGATGATTAATAGATCACGGCGAACTCATATGGTG
GCTAAGAAGGGTTTCTTCTTTGATCTCTTTGTCATCCTCCCTTTACCCCAGCTAGTGATG
TGGGTGGGAATCCCAGCTCTACTAGAGAAAGGATCGACAACAACAGTGATGACAGTGCTA
TTAATAATGTTTCTGTTTCAGTATTTGCCCAAAATCTATCACTCCATTTGCCTCTTGAGA
AGAATGCAGAATCTTTCTGGCTACATCTTTGGCACTGTTTGGTGGGGAATTGCTCTTAAT
ACCATCGCTTATTTCGTCGCCTCGCACGCTGTGGGGGCATGTTGGTACTTGCTAGGAATC
CAAAGGGCAGCAAAATGTCTAAAAGAACAGTGCAGAGTTACAAAGGGTTGTGGCCTGAAT
ATGTTGGCATGTCAAGAGCCAATTTACTATGGCACAAGTAGTTTGGTGAAGGAAAAAAGT
CGATTAATTTGGGGTGAAACCAGTAATGCAAGATTTACATGCTTAAACAATGGCGAAAAT
TTTGATTATGGAGCTTATAAATGGACTGTTCAACTTTTTGCAAATGAAAATCGTTTTGAG
AAGATACTCCTTCCCATCTTTTGGGGTCTCATGACTCTCAGTACATTTGGAAACTTGGAG
AGCACAACAGATTGGCTAGAAGTGATTTTCATAATCATCGTTCTTACCTCTGGGCTAATT
CTGGTCACCATGTTCATTGGTAATATCAAGGTGTTCTTGCATGCAACAACATCAAAGAAA
CAGGCAATGCAACTGAAAATGAGAAAGATAGAATGGTGGATGAGAAGTAGACGTTTGCCT
CGGGAGTTAAAGCAGAGAACTCGAAATTTTGAAAGGCAAAAATGGGCAGCAATGAGAGGA
GTTGATGAATGTGAAATGATCAGAAATCTGCCCGAGGGCCTTAGGAGGGACATTAAATAT
CATCTATGTTTGGACTTGGTCAGGCAGGTGCCTTTGTTTCAACATATGGATAATTTGGTG
CTCGAGAACATATGTGATCGGGTTAAGTCCCTGATTTTTACAAAGGGGGAAACGATAACA
AAAGAGGGTGATCCAGTTCAGAGAATGTTATTCATTGTAAGAGGTCACCTCCAAAGTAGT
CAATTTTTGCGAGATGGTGTGAAAAGTTGTTGCATGTTAGGCCCCGGCAACTTCAGCGGA
GATGAACTTCTGTCATGGTGCCTCCGGCGGCCTTTTGTAGAGCGGCTACCGCCGTCGTCA
TCGACACTGGTGACGCTTGAGACCACCGAAGCCTTCGGCCTTGAGGCCGAAGATGTCAAG
TATGTCACACAACATTTCAGGTATACATTTGTGAAAGAAAAAGTGAAGAGAAGTGCAAGG
TATTATTCACCAGGGTGGAGAACTTGGGGTGCTGTTGCTATTCAATTAGCTTGGAGAAGA
TACAAACATCGTTTAACACTTACTTCTTTGTCTTTCATTAGACCAAGAAGGCCATTGTCT
CGTTGTTCTTCGCTAGGGGAAGATAGACTTAGGATTTATACTGCTTTGTTGACTTCACCT
AAGCCAAATCAAGATGATTTTGATTTCTAA

Peptide Sequence

PEP ID

XP_016514067.1
PEP Infomation

PREDICTED: cyclic nucleotide-gated ion channel 4-like [Nicotiana tabacum]
Sequence

MTSHYEDIYSVSDDDNDDDEEEEIEEEEENNSEECNKIQEGRNKGRLIIEFFSRNKIIDP
RAQWVQEWNRVFLLVCAIGLFLDPLFFYALSISENCMCLFVDGWFAVTVTVLRCMTDALH
VWNMWLQFKMINRSRRTHMVAKKGFFFDLFVILPLPQLVMWVGIPALLEKGSTTTVMTVL
LIMFLFQYLPKIYHSICLLRRMQNLSGYIFGTVWWGIALNTIAYFVASHAVGACWYLLGI
QRAAKCLKEQCRVTKGCGLNMLACQEPIYYGTSSLVKEKSRLIWGETSNARFTCLNNGEN
FDYGAYKWTVQLFANENRFEKILLPIFWGLMTLSTFGNLESTTDWLEVIFIIIVLTSGLI
LVTMFIGNIKVFLHATTSKKQAMQLKMRKIEWWMRSRRLPRELKQRTRNFERQKWAAMRG
VDECEMIRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDNLVLENICDRVKSLIFTKGETIT
KEGDPVQRMLFIVRGHLQSSQFLRDGVKSCCMLGPGNFSGDELLSWCLRRPFVERLPPSS
STLVTLETTEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWGAVAIQLAWRR
YKHRLTLTSLSFIRPRRPLSRCSSLGEDRLRIYTALLTSPKPNQDDFDF

Transcript Sequence

Gene sequence data has not been registered.